STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKX96149.1Glycosyl hydrolase, family 88; KEGG: rle:pRL120662 5.0e-47 ugl; putative unsaturated glucuronyl hydrolase; K01238; Psort location: Cytoplasmic, score: 9.26. (408 aa)    
Predicted Functional Partners:
EKX99197.1
Hypothetical protein; KEGG: rmr:Rmar_2469 2.0e-24 pectinesterase K01051.
 
     0.718
EKX96148.1
Heparinase II/III-like protein.
 
  
 0.700
EKX96147.1
Hypothetical protein.
       0.628
EKY03935.1
Hypothetical protein.
 
     0.625
EKY01972.1
KEGG: pru:PRU_2301 8.0e-120 idnO; gluconate 5-dehydrogenase K00046; Psort location: Cytoplasmic, score: 9.26.
  
     0.515
EKX96146.1
TonB-dependent receptor; KEGG: shn:Shewana3_2312 6.3e-16 1-(5-phosphoribosyl)-5- K01814; Psort location: OuterMembrane, score: 10.00.
       0.510
EKY02829.1
Response regulator receiver domain protein.
  
   
 0.423
EKX96221.1
Response regulator receiver domain protein; KEGG: dfe:Dfer_0792 2.5e-148 histidine kinase; Psort location: CytoplasmicMembrane, score: 9.82.
  
   
 0.418
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.