Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EKX95912.1DNA binding domain, excisionase family. (97 aa)    
Predicted Functional Partners:
EKX95911.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.944
EKY03884.1
Pyruvate synthase; KEGG: pmz:HMPREF0659_A5561 0. nifJ; pyruvate synthase K03737; Psort location: Cytoplasmic, score: 8.96.
     
 0.779
EKX99749.1
Site-specific recombinase, phage integrase family; KEGG: apb:SAR116_1915 0.0039 tyrosine recombinase XerD K04763; Psort location: Cytoplasmic, score: 8.96; Belongs to the 'phage' integrase family.
  
     0.752
EKX95909.1
Hypothetical protein; KEGG: csc:Csac_0882 1.1e-07 DNA primase; K02316 DNA primase; Psort location: Cytoplasmic, score: 8.96.
 
     0.706
EKX95908.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.686
EKX95910.1
Hypothetical protein.
       0.686
EKX95907.1
Hypothetical protein; KEGG: tin:Tint_2201 2.2e-12 DNA topoisomerase.
 
     0.674
EKX95913.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.622
EKY02824.1
Fumarate hydratase class I; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
     
  0.562
EKX97521.1
KEGG: pmz:HMPREF0659_A6381 1.2e-267 2-oxoacid:acceptor oxidoreductase, alpha subunit; K00174 2-oxoglutarate ferredoxin oxidoreductase subunit alpha; Psort location: Cytoplasmic, score: 8.96.
     
 0.473
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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