Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EKX95918.1Hypothetical protein. (151 aa)    
Predicted Functional Partners:
EKX95919.1
Hypothetical protein.
       0.795
EKX95920.1
KEGG: pmz:HMPREF0659_A6173 7.0e-160 PPIC-type PPIase domain protein; K03771 peptidyl-prolyl cis-trans isomerase SurA; Psort location: Periplasmic, score: 9.76.
       0.553
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
       0.425
EKX95921.1
KEGG: pmz:HMPREF0659_A6174 2.2e-149 PPIC-type PPIase domain protein; K03770 peptidyl-prolyl cis-trans isomerase D; Psort location: CytoplasmicMembrane, score: 9.99.
       0.402
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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