Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EKX95919.1Hypothetical protein. (569 aa)    
Predicted Functional Partners:
EKX95918.1
Hypothetical protein.
       0.795
EKX95920.1
KEGG: pmz:HMPREF0659_A6173 7.0e-160 PPIC-type PPIase domain protein; K03771 peptidyl-prolyl cis-trans isomerase SurA; Psort location: Periplasmic, score: 9.76.
 
  
 0.729
EKY02891.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.719
EKY01487.1
Hypothetical protein; KEGG: cwo:Cwoe_1613 7.1e-09 phosphatidylinositol alpha-mannosyltransferase K08256; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.686
EKY04287.1
Hypothetical protein.
  
     0.677
EKX96443.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.675
EKX99627.1
Hypothetical protein.
  
     0.671
EKX99867.1
Permease, YjgP/YjgQ family; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.662
EKX99500.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82.
  
    0.653
EKX99833.1
Sporulation and cell division repeat protein; KEGG: bha:BH1294 0.0032 cwlC; N-acetylmuramoyl-L-alanine amidase (sporulation mother cell wall hydrolase) K01448; Psort location: Periplasmic, score: 9.83.
  
    0.646
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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