STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tldDDNA gyrase modulator. (462 aa)    
Predicted Functional Partners:
AFS77756.1
TldD/PmbA family protein.
 
    
0.855
coaE
dephospho-CoA kinase CoaE; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.
      0.604
AFS77754.1
Adenylate cyclase.
       0.491
Your Current Organism:
Gottschalkia acidurici
NCBI taxonomy Id: 1128398
Other names: Clostridium acidurici 9a, G. acidurici 9a, Gottschalkia acidurici 9a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.