STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UHOR_00579Related to deubiquitinating enzyme ubh1; Belongs to the peptidase C19 family. (1064 aa)    
Predicted Functional Partners:
UHOR_08340
WD_REPEATS_REGION domain-containing protein.
    
 0.990
UHOR_04486
Related to WD40 repeat protein CreC.
    
 0.986
UHOR_06600
Probable ubiquitin/ribosomal protein S27a fusion protein.
    
 0.944
UHOR_06552
Probable polyubiquitin.
    
 0.913
UHOR_03976
Probable RPL40A-Ubiquitin.
    
 0.901
UHOR_01637
RRN7-type domain-containing protein.
    
 0.901
UHOR_00919
Related to Nuclear receptor co-repressor/HDAC3 complex subunit TBLR1.
    
 0.852
UHOR_05934
Probable cell cycle regulatory protein.
    
 0.852
UHOR_03486
Uncharacterized protein.
    
 0.852
UHOR_04822
Related to TAF5-TFIID and SAGA subunit.
    
 0.852
Your Current Organism:
Ustilago hordei
NCBI taxonomy Id: 1128400
Other names: U. hordei Uh4857-4, Ustilago hordei Uh4857-4
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