STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000380225_00854Unannotated protein. (581 aa)    
Predicted Functional Partners:
GCA_000380225_02671
Unannotated protein.
    
 0.765
GCA_000380225_00855
Unannotated protein.
 
   
 0.604
GCA_000380225_01165
Unannotated protein.
  
  
 
0.597
GCA_000380225_00853
Unannotated protein.
       0.574
GCA_000380225_02621
Unannotated protein.
 
     0.547
GCA_000380225_01327
Unannotated protein.
 
   
  0.535
GCA_000380225_03910
Unannotated protein.
  
    0.521
GCA_000380225_03155
Unannotated protein.
   
 0.471
GCA_000380225_00968
Unannotated protein.
  
     0.469
GCA_000380225_01235
Unannotated protein.
  
  0.467
Your Current Organism:
filamentous cyanobacterium
NCBI taxonomy Id: 1128427
Other names: Cyclospexia valenium ESFC-1, Elkhorn Slough Filamentous Cyanobacterium-1, f. cyanobacterium ESFC-1, filamentous cyanobacterium ESFC-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.