STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000380225_01489Unannotated protein. (384 aa)    
Predicted Functional Partners:
GCA_000380225_03053
Unannotated protein.
  
 
 0.803
GCA_000380225_04377
Unannotated protein.
  
 
  0.731
GCA_000380225_03748
Unannotated protein.
   
 0.727
GCA_000380225_01074
Unannotated protein.
 
 
 0.686
GCA_000380225_02132
Unannotated protein.
  
    0.625
GCA_000380225_00324
Unannotated protein.
  
 
 0.624
GCA_000380225_01666
Unannotated protein.
   
  
 0.619
GCA_000380225_01964
Unannotated protein.
   
 
 0.615
GCA_000380225_02619
Unannotated protein.
  
 0.587
GCA_000380225_02237
Unannotated protein.
   
 0.571
Your Current Organism:
filamentous cyanobacterium
NCBI taxonomy Id: 1128427
Other names: Cyclospexia valenium ESFC-1, Elkhorn Slough Filamentous Cyanobacterium-1, f. cyanobacterium ESFC-1, filamentous cyanobacterium ESFC-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.