STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ29239.1Hypothetical protein. (166 aa)    
Predicted Functional Partners:
SDK03266.1
Hypothetical protein.
  
 0.989
SDK39567.1
PAS domain S-box-containing protein.
  
 0.987
SDK13525.1
Hypothetical protein.
  
 0.979
SDJ56883.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
   
 0.965
SDJ57877.1
Methylase of chemotaxis methyl-accepting proteins.
   
 0.950
SDJ76725.1
His Kinase A (phospho-acceptor) domain-containing protein.
   
 0.943
SDK20941.1
PAS domain S-box-containing protein.
   
 0.943
SDJ66897.1
His Kinase A (phospho-acceptor) domain-containing protein.
  
 0.906
SDJ29260.1
P63C domain-containing protein.
 
     0.860
SDK16775.1
Signal transduction histidine kinase.
   
 0.847
Your Current Organism:
Flavobacterium noncentrifugens
NCBI taxonomy Id: 1128970
Other names: CGMCC 1.10076, F. noncentrifugens, Flavobacterium noncentrifugens Zhu et al. 2013, Flavobacterium sp. R-HLS-17, NBRC 108844, strain R-HLS-17
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.