STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDK21278.18-oxo-dGTP diphosphatase; Belongs to the Nudix hydrolase family. (140 aa)    
Predicted Functional Partners:
SDJ67075.1
Nicotinamide-nucleotide amidase; Belongs to the CinA family.
    
 0.817
SDK21252.1
Acyl-CoA hydrolase.
  
    0.784
ribB
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
     
 0.780
SDJ20048.1
2-amino-4-hydroxy-6- hydroxymethyldihydropteridinediphosphokinase.
    
 0.621
SDJ75356.1
Nicotinate-nucleotide pyrophosphorylase [carboxylating]; Belongs to the NadC/ModD family.
 
  
 0.593
SDJ18247.1
NAD+ synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source.
  
 
 0.546
SDJ24605.1
A/G-specific DNA-adenine glycosylase; Adenine glycosylase active on G-A mispairs.
  
 
 0.542
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
     
 0.538
SDJ59384.1
Hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family.
    
 0.537
adk
Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.
    
 0.537
Your Current Organism:
Flavobacterium noncentrifugens
NCBI taxonomy Id: 1128970
Other names: CGMCC 1.10076, F. noncentrifugens, Flavobacterium noncentrifugens Zhu et al. 2013, Flavobacterium sp. R-HLS-17, NBRC 108844, strain R-HLS-17
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.