Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDD43086.1 | SDD43111.1 | SAMN04488499_1001219 | SAMN04488499_1001220 | Uncharacterized protein YrrD, contains PRC-barrel domain. | Hypothetical protein. | 0.670 |
SDD43086.1 | SDD43842.1 | SAMN04488499_1001219 | SAMN04488499_1001245 | Uncharacterized protein YrrD, contains PRC-barrel domain. | Hypothetical protein. | 0.610 |
SDD43086.1 | SDE23416.1 | SAMN04488499_1001219 | SAMN04488499_101061 | Uncharacterized protein YrrD, contains PRC-barrel domain. | Hypothetical protein. | 0.469 |
SDD43086.1 | SDE55220.1 | SAMN04488499_1001219 | SAMN04488499_101613 | Uncharacterized protein YrrD, contains PRC-barrel domain. | Fumarate reductase flavoprotein subunit. | 0.441 |
SDD43086.1 | SDE55506.1 | SAMN04488499_1001219 | SAMN04488499_101621 | Uncharacterized protein YrrD, contains PRC-barrel domain. | Tetraheme cytochrome c subunit of nitrate or TMAO reductase. | 0.523 |
SDD43086.1 | SDF05446.1 | SAMN04488499_1001219 | SAMN04488499_103135 | Uncharacterized protein YrrD, contains PRC-barrel domain. | HutP protein. | 0.461 |
SDD43086.1 | napC | SAMN04488499_1001219 | SAMN04488499_102818 | Uncharacterized protein YrrD, contains PRC-barrel domain. | Tetraheme cytochrome c subunit of nitrate or TMAO reductase. | 0.443 |
SDD43086.1 | urdA | SAMN04488499_1001219 | SAMN04488499_103650 | Uncharacterized protein YrrD, contains PRC-barrel domain. | Fumarate reductase flavoprotein subunit. | 0.435 |
SDD43086.1 | vanW_2 | SAMN04488499_1001219 | SAMN04488499_1001218 | Uncharacterized protein YrrD, contains PRC-barrel domain. | Vancomycin resistance protein YoaR, contains peptidoglycan-binding and VanW domains. | 0.535 |
SDD43086.1 | yndE_3 | SAMN04488499_1001219 | SAMN04488499_102630 | Uncharacterized protein YrrD, contains PRC-barrel domain. | Spore germination protein. | 0.494 |
SDD43111.1 | SDD43086.1 | SAMN04488499_1001220 | SAMN04488499_1001219 | Hypothetical protein. | Uncharacterized protein YrrD, contains PRC-barrel domain. | 0.670 |
SDD43111.1 | vanW_2 | SAMN04488499_1001220 | SAMN04488499_1001218 | Hypothetical protein. | Vancomycin resistance protein YoaR, contains peptidoglycan-binding and VanW domains. | 0.419 |
SDD43842.1 | SDD43086.1 | SAMN04488499_1001245 | SAMN04488499_1001219 | Hypothetical protein. | Uncharacterized protein YrrD, contains PRC-barrel domain. | 0.610 |
SDD43842.1 | SDE23416.1 | SAMN04488499_1001245 | SAMN04488499_101061 | Hypothetical protein. | Hypothetical protein. | 0.725 |
SDE23416.1 | SDD43086.1 | SAMN04488499_101061 | SAMN04488499_1001219 | Hypothetical protein. | Uncharacterized protein YrrD, contains PRC-barrel domain. | 0.469 |
SDE23416.1 | SDD43842.1 | SAMN04488499_101061 | SAMN04488499_1001245 | Hypothetical protein. | Hypothetical protein. | 0.725 |
SDE55220.1 | SDD43086.1 | SAMN04488499_101613 | SAMN04488499_1001219 | Fumarate reductase flavoprotein subunit. | Uncharacterized protein YrrD, contains PRC-barrel domain. | 0.441 |
SDE55220.1 | SDE55506.1 | SAMN04488499_101613 | SAMN04488499_101621 | Fumarate reductase flavoprotein subunit. | Tetraheme cytochrome c subunit of nitrate or TMAO reductase. | 0.779 |
SDE55220.1 | napC | SAMN04488499_101613 | SAMN04488499_102818 | Fumarate reductase flavoprotein subunit. | Tetraheme cytochrome c subunit of nitrate or TMAO reductase. | 0.777 |
SDE55506.1 | SDD43086.1 | SAMN04488499_101621 | SAMN04488499_1001219 | Tetraheme cytochrome c subunit of nitrate or TMAO reductase. | Uncharacterized protein YrrD, contains PRC-barrel domain. | 0.523 |
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