STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD43239.1Hypothetical protein. (195 aa)    
Predicted Functional Partners:
mnmE_3
50S ribosome-binding GTPase.
 
     0.955
spoVK_2
Stage V sporulation protein K.
 
     0.838
SDD43206.1
Hypothetical protein.
       0.773
SDD61658.1
Protein of unknown function.
  
     0.679
SDD43134.1
Cystathionine beta-lyase family protein involved in aluminum resistance.
       0.665
SDE60425.1
BofC C-terminal domain-containing protein.
  
     0.657
SDD78091.1
Hypothetical protein.
  
     0.647
mshD_1
Acetyltransferase (GNAT) family protein.
  
     0.644
hflX
GTP-binding protein HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis.
       0.634
SDE84977.1
Ferrous iron transport protein A.
  
     0.629
Your Current Organism:
Sporomusa acidovorans
NCBI taxonomy Id: 112900
Other names: ATCC 49682, DSM 3132, S. acidovorans, strain Mol
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.