Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDD45443.1 | SDD45462.1 | SAMN04488499_1001298 | SAMN04488499_1001299 | Hypothetical protein. | Hypothetical protein. | 0.747 |
SDD45443.1 | SDD45489.1 | SAMN04488499_1001298 | SAMN04488499_1001300 | Hypothetical protein. | Hypothetical protein. | 0.580 |
SDD45443.1 | SDD45536.1 | SAMN04488499_1001298 | SAMN04488499_1001302 | Hypothetical protein. | Hypothetical protein. | 0.428 |
SDD45443.1 | cheC | SAMN04488499_1001298 | SAMN04488499_1001304 | Hypothetical protein. | Chemotaxis protein CheC. | 0.420 |
SDD45443.1 | cheD | SAMN04488499_1001298 | SAMN04488499_1001303 | Hypothetical protein. | Chemotaxis protein CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family. | 0.420 |
SDD45443.1 | fliA_1 | SAMN04488499_1001298 | SAMN04488499_1001301 | Hypothetical protein. | RNA polymerase sigma factor for flagellar operon FliA; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.474 |
SDD45443.1 | rpsB | SAMN04488499_1001298 | SAMN04488499_1001297 | Hypothetical protein. | Small subunit ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family. | 0.452 |
SDD45462.1 | SDD45443.1 | SAMN04488499_1001299 | SAMN04488499_1001298 | Hypothetical protein. | Hypothetical protein. | 0.747 |
SDD45462.1 | SDD45489.1 | SAMN04488499_1001299 | SAMN04488499_1001300 | Hypothetical protein. | Hypothetical protein. | 0.624 |
SDD45462.1 | SDD45536.1 | SAMN04488499_1001299 | SAMN04488499_1001302 | Hypothetical protein. | Hypothetical protein. | 0.453 |
SDD45462.1 | cheC | SAMN04488499_1001299 | SAMN04488499_1001304 | Hypothetical protein. | Chemotaxis protein CheC. | 0.523 |
SDD45462.1 | cheD | SAMN04488499_1001299 | SAMN04488499_1001303 | Hypothetical protein. | Chemotaxis protein CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family. | 0.523 |
SDD45462.1 | fliA_1 | SAMN04488499_1001299 | SAMN04488499_1001301 | Hypothetical protein. | RNA polymerase sigma factor for flagellar operon FliA; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.501 |
SDD45462.1 | rpsB | SAMN04488499_1001299 | SAMN04488499_1001297 | Hypothetical protein. | Small subunit ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family. | 0.522 |
SDD45489.1 | SDD45443.1 | SAMN04488499_1001300 | SAMN04488499_1001298 | Hypothetical protein. | Hypothetical protein. | 0.580 |
SDD45489.1 | SDD45462.1 | SAMN04488499_1001300 | SAMN04488499_1001299 | Hypothetical protein. | Hypothetical protein. | 0.624 |
SDD45489.1 | SDD45536.1 | SAMN04488499_1001300 | SAMN04488499_1001302 | Hypothetical protein. | Hypothetical protein. | 0.599 |
SDD45489.1 | cheC | SAMN04488499_1001300 | SAMN04488499_1001304 | Hypothetical protein. | Chemotaxis protein CheC. | 0.758 |
SDD45489.1 | cheD | SAMN04488499_1001300 | SAMN04488499_1001303 | Hypothetical protein. | Chemotaxis protein CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family. | 0.716 |
SDD45489.1 | fliA_1 | SAMN04488499_1001300 | SAMN04488499_1001301 | Hypothetical protein. | RNA polymerase sigma factor for flagellar operon FliA; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.764 |
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