STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ubiE_6Ubiquinone/menaquinone biosynthesis C-methylase UbiE. (205 aa)    
Predicted Functional Partners:
SDE48820.1
Methyltransferase domain-containing protein.
  
 0.784
hepT
Heptaprenyl diphosphate synthase; Belongs to the FPP/GGPP synthase family.
 
 
 0.588
metH_5
5-methyltetrahydrofolate--homocysteine methyltransferase.
    
 0.579
sfrB_5
Putative selenate reductase.
  
 
 0.555
aas
Bifunctional protein Aas; Acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase.
    
 0.555
hndC_3
NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein.
    
 0.539
hndC_5
NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein.
    
 0.539
sunS_4
Tetratricopeptide repeat-containing protein.
  
 
 0.537
metK
Methionine adenosyltransferase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.
  
 
 0.533
ahcY
Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.
    
 0.526
Your Current Organism:
Sporomusa acidovorans
NCBI taxonomy Id: 112900
Other names: ATCC 49682, DSM 3132, S. acidovorans, strain Mol
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.