STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD77995.1Protein of unknown function. (74 aa)    
Predicted Functional Partners:
SDD77976.1
Protein of unknown function.
 
     0.913
SDE84234.1
Prepilin-type N-terminal cleavage/methylation domain-containing protein.
  
     0.687
SDD43842.1
Hypothetical protein.
  
     0.629
fliA_2
RNA polymerase sigma factor, sigma-70 family.
     
 0.607
SDE05749.1
Protein of unknown function.
  
     0.587
SDD77889.1
YvrJ protein family protein.
       0.567
SDE73003.1
Sensor_kinase_SpoOB-type, alpha-helical domain.
  
     0.558
SDF86027.1
Transcriptional regulator, PadR family.
  
     0.529
SDF22418.1
Protein of unknown function.
  
     0.517
SDF22318.1
Glycosyl transferase family 2.
  
     0.514
Your Current Organism:
Sporomusa acidovorans
NCBI taxonomy Id: 112900
Other names: ATCC 49682, DSM 3132, S. acidovorans, strain Mol
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.