STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
padHPhenylglyoxylate:acceptor oxidoreductase PadH subunit. (418 aa)    
Predicted Functional Partners:
hcp_2
Hydroxylamine reductase; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O.
 
 
 0.908
hcp_1
Hydroxylamine reductase; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O.
 
 
 0.908
padI_2
Phenylglyoxylate dehydrogenase beta subunit.
    
 0.863
napA
Periplasmic nitrate reductase subunit NapA apoprotein; Catalytic subunit of the nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite.
 
 0.842
fprA
Flavorubredoxin.
 
  
 0.840
padE_4
4Fe-4S binding domain-containing protein.
    
 0.816
padG_1
Pyruvate ferredoxin oxidoreductase alpha subunit.
    
  0.815
SDE74882.1
Ni-dependent carbon monoxide dehydrogenase precursor.
  
 
 0.745
cooS2
Carbon-monoxide dehydrogenase catalytic subunit.
  
 
 0.745
cooS1
Carbon-monoxide dehydrogenase catalytic subunit.
  
 
 0.745
Your Current Organism:
Sporomusa acidovorans
NCBI taxonomy Id: 112900
Other names: ATCC 49682, DSM 3132, S. acidovorans, strain Mol
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