STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE36377.1Protein of unknown function DUF111. (178 aa)    
Predicted Functional Partners:
SDE36344.1
Flavodoxin domain-containing protein.
  
    0.674
tilS_2
Uncharacterized protein.
  
  
 0.587
SDE36543.1
Hypothetical protein.
  
  
 0.578
SDE36399.1
Hypothetical protein.
       0.533
guaA_2
Uncharacterized protein.
  
  
 0.500
SDE84524.1
Hypothetical protein.
  
  
 0.489
SDF37742.1
AIR carboxylase.
  
  
 0.489
nikMN
Cobalt/nickel transport system permease protein.
  
    0.484
Your Current Organism:
Sporomusa acidovorans
NCBI taxonomy Id: 112900
Other names: ATCC 49682, DSM 3132, S. acidovorans, strain Mol
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.