STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xylFMonosaccharide ABC transporter substrate-binding protein, CUT2 family. (350 aa)    
Predicted Functional Partners:
rbsA_1
Ribose transport system ATP-binding protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.999
rbsC_1
Monosaccharide ABC transporter membrane protein, CUT2 family; Belongs to the binding-protein-dependent transport system permease family.
 
 0.989
rbsC_2
Monosaccharide ABC transporter membrane protein, CUT2 family; Belongs to the binding-protein-dependent transport system permease family.
 
 0.978
lsrD
Monosaccharide ABC transporter membrane protein, CUT2 family; Belongs to the binding-protein-dependent transport system permease family.
 
 0.978
rbsA_2
Monosaccharide ABC transporter ATP-binding protein, CUT2 family.
 
 0.973
rpfC_1
Hypothetical protein.
  
 0.969
bvgS
PAS/PAC sensor hybrid histidine kinase.
   
 0.966
rpfC_2
Signal transduction histidine kinase.
   
 0.955
xylG
Monosaccharide ABC transporter ATP-binding protein, CUT2 family.
 
 0.935
rbsD
Simple sugar transport system permease protein; Belongs to the RbsD / FucU family.
 
  
 0.934
Your Current Organism:
Sporomusa acidovorans
NCBI taxonomy Id: 112900
Other names: ATCC 49682, DSM 3132, S. acidovorans, strain Mol
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.