STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
abgB_2Aminobenzoyl-glutamate utilization protein B. (489 aa)    
Predicted Functional Partners:
abgA
Aminobenzoyl-glutamate utilization protein A.
 
    
0.688
ywrD
Gamma-glutamyltransferase 2. Threonine peptidase. MEROPS family T03.
 
  
  0.583
yjmB
Sugar (Glycoside-Pentoside-Hexuronide) transporter.
  
    0.540
preT
Glutamate synthase (NADPH) GltB3 subunit.
    
  0.512
abgT
AbgT putative transporter family protein.
 
  
 0.496
amaB
N-carbamoyl-L-amino-acid hydrolase.
 
  
 0.490
SDE61935.1
N-carbamoyl-L-amino-acid hydrolase.
 
  
 0.488
purL
Phosphoribosylformylglycinamidine synthase.
    
  0.482
SDE97269.1
Protein of unknown function.
 
     0.459
SDE94630.1
Hypothetical protein.
   
 
  0.455
Your Current Organism:
Sporomusa acidovorans
NCBI taxonomy Id: 112900
Other names: ATCC 49682, DSM 3132, S. acidovorans, strain Mol
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.