Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SDF44360.1 | SDF44378.1 | SAMN04488499_104938 | SAMN04488499_104939 | Protein of unknown function. | Protein of unknown function. | 0.547 |
| SDF44360.1 | ykuD_2 | SAMN04488499_104938 | SAMN04488499_101799 | Protein of unknown function. | Putative peptidoglycan binding domain-containing protein. | 0.547 |
| SDF44360.1 | yocH_2 | SAMN04488499_104938 | SAMN04488499_1017100 | Protein of unknown function. | 3D (Asp-Asp-Asp) domain-containing protein. | 0.518 |
| SDF44378.1 | SDF44360.1 | SAMN04488499_104939 | SAMN04488499_104938 | Protein of unknown function. | Protein of unknown function. | 0.547 |
| SDF44378.1 | yocH_2 | SAMN04488499_104939 | SAMN04488499_1017100 | Protein of unknown function. | 3D (Asp-Asp-Asp) domain-containing protein. | 0.804 |
| SDF62180.1 | yocH_2 | SAMN04488499_106324 | SAMN04488499_1017100 | LysM domain-containing protein. | 3D (Asp-Asp-Asp) domain-containing protein. | 0.804 |
| SDF86260.1 | yocH_2 | SAMN04488499_11065 | SAMN04488499_1017100 | Protein of unknown function. | 3D (Asp-Asp-Asp) domain-containing protein. | 0.804 |
| blaZ | dap | SAMN04488499_103721 | SAMN04488499_102651 | Beta-lactamase class A. | Copper amine oxidase N-terminal domain-containing protein. | 0.648 |
| blaZ | ykuD_2 | SAMN04488499_103721 | SAMN04488499_101799 | Beta-lactamase class A. | Putative peptidoglycan binding domain-containing protein. | 0.526 |
| blaZ | yocH_2 | SAMN04488499_103721 | SAMN04488499_1017100 | Beta-lactamase class A. | 3D (Asp-Asp-Asp) domain-containing protein. | 0.545 |
| dap | blaZ | SAMN04488499_102651 | SAMN04488499_103721 | Copper amine oxidase N-terminal domain-containing protein. | Beta-lactamase class A. | 0.648 |
| dap | ykuD_2 | SAMN04488499_102651 | SAMN04488499_101799 | Copper amine oxidase N-terminal domain-containing protein. | Putative peptidoglycan binding domain-containing protein. | 0.582 |
| dap | yocH_2 | SAMN04488499_102651 | SAMN04488499_1017100 | Copper amine oxidase N-terminal domain-containing protein. | 3D (Asp-Asp-Asp) domain-containing protein. | 0.492 |
| ftsX | yocH_2 | SAMN04488499_10419 | SAMN04488499_1017100 | Cell division transport system permease protein; Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily. | 3D (Asp-Asp-Asp) domain-containing protein. | 0.470 |
| pgi | tal | SAMN04488499_100432 | SAMN04488499_101062 | Glucose-6-phosphate isomerase; Belongs to the GPI family. | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily. | 0.925 |
| pgi | ykuD_2 | SAMN04488499_100432 | SAMN04488499_101799 | Glucose-6-phosphate isomerase; Belongs to the GPI family. | Putative peptidoglycan binding domain-containing protein. | 0.523 |
| pgi | yocH_2 | SAMN04488499_100432 | SAMN04488499_1017100 | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 3D (Asp-Asp-Asp) domain-containing protein. | 0.509 |
| tal | pgi | SAMN04488499_101062 | SAMN04488499_100432 | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.925 |
| tal | ykuD_2 | SAMN04488499_101062 | SAMN04488499_101799 | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily. | Putative peptidoglycan binding domain-containing protein. | 0.509 |
| tal | yocH_2 | SAMN04488499_101062 | SAMN04488499_1017100 | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily. | 3D (Asp-Asp-Asp) domain-containing protein. | 0.506 |
page 1 of 2