STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE74129.1DRTGG domain-containing protein. (126 aa)    
Predicted Functional Partners:
rsbT
Anti-sigma regulatory factor (Ser/Thr protein kinase).
   
 0.995
hydA_2
Iron only hydrogenase large subunit, C-terminal domain.
 
   
 0.934
SDE74072.1
DRTGG domain-containing protein.
 
  
 0.921
dnaE2
Hypothetical protein.
 
   
 0.918
pleC_1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
   
 0.896
hndB_1
NAD(P)-dependent iron-only hydrogenase iron-sulfur protein.
 
   
 0.883
hydA_3
Iron only hydrogenase large subunit, C-terminal domain.
 
   
 0.817
hndB_2
NAD(P)-dependent iron-only hydrogenase iron-sulfur protein.
 
   
 0.801
guaB_2
IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
 0.675
guaA_1
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
    
  0.596
Your Current Organism:
Sporomusa acidovorans
NCBI taxonomy Id: 112900
Other names: ATCC 49682, DSM 3132, S. acidovorans, strain Mol
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