STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE83244.1MoxR-like ATPase. (287 aa)    
Predicted Functional Partners:
SDE83259.1
Hypothetical protein.
 
   
 0.954
SDE15740.1
Hypothetical protein.
 
   
 0.806
speA
Arginine decarboxylase.
   
 
 0.760
bchI_3
Protoporphyrin IX magnesium-chelatase.
  
 
 0.666
bchI_2
Protoporphyrin IX magnesium-chelatase.
  
 
 0.666
hutI_3
Imidazolonepropionase.
  
    0.606
rdmC
Pimeloyl-ACP methyl ester carboxylesterase.
  
     0.598
cobN_3
CobN/Magnesium Chelatase.
  
  
 0.546
SDF65090.1
Hypothetical protein.
  
     0.540
SDE25480.1
Hypothetical protein.
 
    0.537
Your Current Organism:
Sporomusa acidovorans
NCBI taxonomy Id: 112900
Other names: ATCC 49682, DSM 3132, S. acidovorans, strain Mol
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.