STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE97196.1Hypothetical protein. (148 aa)    
Predicted Functional Partners:
SDE97269.1
Protein of unknown function.
     0.991
abgB_1
Amidohydrolase; Belongs to the peptidase M20A family.
 
     0.842
abgB_3
Amidohydrolase; Belongs to the peptidase M20A family.
 
     0.668
SDE97305.1
Hypothetical protein.
       0.538
SDE36864.1
DNA-binding transcriptional regulator, MarR family.
  
     0.490
abgB_2
Aminobenzoyl-glutamate utilization protein B.
 
     0.448
SDF52150.1
Sugar phosphate isomerase/epimerase.
  
     0.442
SDF60982.1
Hypothetical protein.
  
     0.432
Your Current Organism:
Sporomusa acidovorans
NCBI taxonomy Id: 112900
Other names: ATCC 49682, DSM 3132, S. acidovorans, strain Mol
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.