STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
metAHomoserine O-succinyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine; Belongs to the MetA family. (318 aa)    
Predicted Functional Partners:
mdeA_1
O-acetylhomoserine sulfhydrylase.
 
 
 0.944
mccB_2
Cysteine synthase /cystathionine gamma-synthase.
 
 
 0.917
hom
Homoserine dehydrogenase.
  
 
 0.905
yitJ_2
5,10-methylenetetrahydrofolate reductase (ferredoxin); Belongs to the methylenetetrahydrofolate reductase family.
  
  
 0.869
yitJ_1
Methylenetetrahydrofolate reductase (NADPH).
  
  
 0.869
hisE
phosphoribosyl-ATP pyrophosphatase; In the N-terminal section; belongs to the PRA-CH family.
 
    0.863
metH_5
5-methyltetrahydrofolate--homocysteine methyltransferase.
  
  
 0.862
metC
Cys/Met metabolism PLP-dependent enzyme.
 
 
 0.847
mccB_1
Methionine-gamma-lyase.
 
 
 0.843
mdeA_2
Methionine-gamma-lyase.
 
 
 0.839
Your Current Organism:
Sporomusa acidovorans
NCBI taxonomy Id: 112900
Other names: ATCC 49682, DSM 3132, S. acidovorans, strain Mol
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