Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDE17041.1 | metH_5 | SAMN04488499_100955 | SAMN04488499_102135 | Prephenate dehydrogenase. | 5-methyltetrahydrofolate--homocysteine methyltransferase. | 0.481 |
SDE17041.1 | norG | SAMN04488499_100955 | SAMN04488499_103720 | Prephenate dehydrogenase. | GntR family transcriptional regulator, regulator for abcA and norABC. | 0.513 |
SDE17041.1 | pheA | SAMN04488499_100955 | SAMN04488499_100921 | Prephenate dehydrogenase. | Prephenate dehydratase. | 0.852 |
SDE17041.1 | trpA | SAMN04488499_100955 | SAMN04488499_100925 | Prephenate dehydrogenase. | Tryptophan synthase, alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.788 |
SDE17041.1 | tyrB | SAMN04488499_100955 | SAMN04488499_1009108 | Prephenate dehydrogenase. | Aromatic-amino-acid transaminase. | 0.657 |
SDE48820.1 | SDF16215.1 | SAMN04488499_101497 | SAMN04488499_103553 | Methyltransferase domain-containing protein. | methylmalonyl-CoA epimerase. | 0.624 |
SDE48820.1 | metH_5 | SAMN04488499_101497 | SAMN04488499_102135 | Methyltransferase domain-containing protein. | 5-methyltetrahydrofolate--homocysteine methyltransferase. | 0.741 |
SDE48820.1 | mnmC | SAMN04488499_101497 | SAMN04488499_102098 | Methyltransferase domain-containing protein. | Heterodisulfide reductase subunit A. | 0.678 |
SDE48820.1 | norG | SAMN04488499_101497 | SAMN04488499_103720 | Methyltransferase domain-containing protein. | GntR family transcriptional regulator, regulator for abcA and norABC. | 0.576 |
SDE48820.1 | pheA | SAMN04488499_101497 | SAMN04488499_100921 | Methyltransferase domain-containing protein. | Prephenate dehydratase. | 0.513 |
SDE48820.1 | trpA | SAMN04488499_101497 | SAMN04488499_100925 | Methyltransferase domain-containing protein. | Tryptophan synthase, alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.819 |
SDE48820.1 | tyrB | SAMN04488499_101497 | SAMN04488499_1009108 | Methyltransferase domain-containing protein. | Aromatic-amino-acid transaminase. | 0.418 |
SDF16215.1 | SDE48820.1 | SAMN04488499_103553 | SAMN04488499_101497 | methylmalonyl-CoA epimerase. | Methyltransferase domain-containing protein. | 0.624 |
SDF16215.1 | norG | SAMN04488499_103553 | SAMN04488499_103720 | methylmalonyl-CoA epimerase. | GntR family transcriptional regulator, regulator for abcA and norABC. | 0.519 |
SDF16215.1 | trpA | SAMN04488499_103553 | SAMN04488499_100925 | methylmalonyl-CoA epimerase. | Tryptophan synthase, alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.478 |
SDF16215.1 | tyrB | SAMN04488499_103553 | SAMN04488499_1009108 | methylmalonyl-CoA epimerase. | Aromatic-amino-acid transaminase. | 0.814 |
argO | norG | SAMN04488499_103719 | SAMN04488499_103720 | L-lysine exporter family protein LysE/ArgO. | GntR family transcriptional regulator, regulator for abcA and norABC. | 0.701 |
metH_5 | SDE17041.1 | SAMN04488499_102135 | SAMN04488499_100955 | 5-methyltetrahydrofolate--homocysteine methyltransferase. | Prephenate dehydrogenase. | 0.481 |
metH_5 | SDE48820.1 | SAMN04488499_102135 | SAMN04488499_101497 | 5-methyltetrahydrofolate--homocysteine methyltransferase. | Methyltransferase domain-containing protein. | 0.741 |
metH_5 | mnmC | SAMN04488499_102135 | SAMN04488499_102098 | 5-methyltetrahydrofolate--homocysteine methyltransferase. | Heterodisulfide reductase subunit A. | 0.614 |
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