STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF30202.1Hydrogenase small subunit. (76 aa)    
Predicted Functional Partners:
SDF30252.1
Nickel-dependent hydrogenase.
 
 0.982
SDD74373.1
Hydrogenase large subunit.
 
 0.979
SDE94519.1
Hydrogenase large subunit.
 
 0.976
SDD65932.1
Nickel-dependent hydrogenase.
 
 0.975
hydC
Ni/Fe-hydrogenase 1 B-type cytochrome subunit.
  
 
 0.964
hoxG
Hydrogenase large subunit; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.
 
 0.957
SDF14307.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
   
 
 0.937
SDF76366.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
   
 
 0.937
nifJ_3
Pyruvate:ferredoxin oxidoreductase.
  
 
 0.886
nifJ_5
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 
 0.886
Your Current Organism:
Sporomusa acidovorans
NCBI taxonomy Id: 112900
Other names: ATCC 49682, DSM 3132, S. acidovorans, strain Mol
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.