Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDD58692.1 | hxuC | SAMN04488499_1002119 | SAMN04488499_102278 | Outer membrane transport energization protein TonB. | Outer membrane receptor for ferrienterochelin and colicins. | 0.976 |
SDD58692.1 | prn_1 | SAMN04488499_1002119 | SAMN04488499_104332 | Outer membrane transport energization protein TonB. | Outer membrane autotransporter barrel domain-containing protein. | 0.768 |
SDD97841.1 | SDF46039.1 | SAMN04488499_100660 | SAMN04488499_105036 | Tetratricopeptide repeat-containing protein. | TonB protein C-terminal. | 0.465 |
SDD97841.1 | hxuC | SAMN04488499_100660 | SAMN04488499_102278 | Tetratricopeptide repeat-containing protein. | Outer membrane receptor for ferrienterochelin and colicins. | 0.519 |
SDD97841.1 | prn_1 | SAMN04488499_100660 | SAMN04488499_104332 | Tetratricopeptide repeat-containing protein. | Outer membrane autotransporter barrel domain-containing protein. | 0.789 |
SDE11008.1 | hxuC | SAMN04488499_100828 | SAMN04488499_102278 | Protein TonB. | Outer membrane receptor for ferrienterochelin and colicins. | 0.986 |
SDE11008.1 | prn_1 | SAMN04488499_100828 | SAMN04488499_104332 | Protein TonB. | Outer membrane autotransporter barrel domain-containing protein. | 0.869 |
SDE62523.1 | hxuC | SAMN04488499_1017125 | SAMN04488499_102278 | TonB family C-terminal domain-containing protein. | Outer membrane receptor for ferrienterochelin and colicins. | 0.983 |
SDE62523.1 | prn_1 | SAMN04488499_1017125 | SAMN04488499_104332 | TonB family C-terminal domain-containing protein. | Outer membrane autotransporter barrel domain-containing protein. | 0.810 |
SDE81589.1 | hxuC | SAMN04488499_102235 | SAMN04488499_102278 | Protein TonB. | Outer membrane receptor for ferrienterochelin and colicins. | 0.974 |
SDE81589.1 | prn_1 | SAMN04488499_102235 | SAMN04488499_104332 | Protein TonB. | Outer membrane autotransporter barrel domain-containing protein. | 0.785 |
SDF13271.1 | hxuC | SAMN04488499_103419 | SAMN04488499_102278 | Outer membrane transport energization protein TonB. | Outer membrane receptor for ferrienterochelin and colicins. | 0.980 |
SDF13271.1 | prn_1 | SAMN04488499_103419 | SAMN04488499_104332 | Outer membrane transport energization protein TonB. | Outer membrane autotransporter barrel domain-containing protein. | 0.812 |
SDF46039.1 | SDD97841.1 | SAMN04488499_105036 | SAMN04488499_100660 | TonB protein C-terminal. | Tetratricopeptide repeat-containing protein. | 0.465 |
SDF46039.1 | hxuC | SAMN04488499_105036 | SAMN04488499_102278 | TonB protein C-terminal. | Outer membrane receptor for ferrienterochelin and colicins. | 0.983 |
SDF46039.1 | prn_1 | SAMN04488499_105036 | SAMN04488499_104332 | TonB protein C-terminal. | Outer membrane autotransporter barrel domain-containing protein. | 0.826 |
hxuC | SDD58692.1 | SAMN04488499_102278 | SAMN04488499_1002119 | Outer membrane receptor for ferrienterochelin and colicins. | Outer membrane transport energization protein TonB. | 0.976 |
hxuC | SDD97841.1 | SAMN04488499_102278 | SAMN04488499_100660 | Outer membrane receptor for ferrienterochelin and colicins. | Tetratricopeptide repeat-containing protein. | 0.519 |
hxuC | SDE11008.1 | SAMN04488499_102278 | SAMN04488499_100828 | Outer membrane receptor for ferrienterochelin and colicins. | Protein TonB. | 0.986 |
hxuC | SDE62523.1 | SAMN04488499_102278 | SAMN04488499_1017125 | Outer membrane receptor for ferrienterochelin and colicins. | TonB family C-terminal domain-containing protein. | 0.983 |
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