Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SDF58468.1 | hemE_1 | SAMN04488499_106017 | SAMN04488499_106011 | Uroporphyrinogen decarboxylase (URO-D); Belongs to the uroporphyrinogen decarboxylase family. | Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family. | 0.742 |
| SDF58468.1 | yjiA_1 | SAMN04488499_106017 | SAMN04488499_106010 | Uroporphyrinogen decarboxylase (URO-D); Belongs to the uroporphyrinogen decarboxylase family. | GTPase, G3E family. | 0.633 |
| folE2 | yjiA_1 | SAMN04488499_102379 | SAMN04488499_106010 | GTP cyclohydrolase I; Converts GTP to 7,8-dihydroneopterin triphosphate. | GTPase, G3E family. | 0.686 |
| hemE_1 | SDF58468.1 | SAMN04488499_106011 | SAMN04488499_106017 | Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family. | Uroporphyrinogen decarboxylase (URO-D); Belongs to the uroporphyrinogen decarboxylase family. | 0.742 |
| hemE_1 | yjiA_1 | SAMN04488499_106011 | SAMN04488499_106010 | Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family. | GTPase, G3E family. | 0.863 |
| map_1 | rpmB | SAMN04488499_101186 | SAMN04488499_1001184 | Methionyl aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily. | Large subunit ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family. | 0.501 |
| map_1 | rpmGA | SAMN04488499_101186 | SAMN04488499_107616 | Methionyl aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily. | Large subunit ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family. | 0.517 |
| map_1 | rpsN1 | SAMN04488499_101186 | SAMN04488499_104741 | Methionyl aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily. | Small subunit ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site. | 0.969 |
| map_1 | yjiA_1 | SAMN04488499_101186 | SAMN04488499_106010 | Methionyl aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily. | GTPase, G3E family. | 0.726 |
| map_2 | rpmB | SAMN04488499_104732 | SAMN04488499_1001184 | Methionyl aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily. | Large subunit ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family. | 0.501 |
| map_2 | rpmGA | SAMN04488499_104732 | SAMN04488499_107616 | Methionyl aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily. | Large subunit ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family. | 0.517 |
| map_2 | rpsN1 | SAMN04488499_104732 | SAMN04488499_104741 | Methionyl aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily. | Small subunit ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site. | 0.983 |
| map_2 | yjiA_1 | SAMN04488499_104732 | SAMN04488499_106010 | Methionyl aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily. | GTPase, G3E family. | 0.726 |
| rpmB | map_1 | SAMN04488499_1001184 | SAMN04488499_101186 | Large subunit ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family. | Methionyl aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily. | 0.501 |
| rpmB | map_2 | SAMN04488499_1001184 | SAMN04488499_104732 | Large subunit ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family. | Methionyl aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily. | 0.501 |
| rpmB | rpmGA | SAMN04488499_1001184 | SAMN04488499_107616 | Large subunit ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family. | Large subunit ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family. | 0.997 |
| rpmB | rpsN1 | SAMN04488499_1001184 | SAMN04488499_104741 | Large subunit ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family. | Small subunit ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site. | 0.992 |
| rpmB | yjiA_1 | SAMN04488499_1001184 | SAMN04488499_106010 | Large subunit ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family. | GTPase, G3E family. | 0.661 |
| rpmB | znuA | SAMN04488499_1001184 | SAMN04488499_10685 | Large subunit ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family. | Zinc transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family. | 0.807 |
| rpmGA | map_1 | SAMN04488499_107616 | SAMN04488499_101186 | Large subunit ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family. | Methionyl aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily. | 0.517 |
page 1 of 3