STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glnB_1Nitrogen regulatory protein P-II family; Belongs to the P(II) protein family. (121 aa)    
Predicted Functional Partners:
nrgA_3
Ammonium transporter.
 0.998
nrgA_1
Ammonium transporter.
 0.995
nrgA_2
Ammonium transporter.
 0.988
argB
N-acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.
  
 
 
 0.888
kinA_3
PAS domain S-box-containing protein.
  
 0.818
kinE_3
Signal transduction histidine kinase.
  
 0.818
kinE_5
PAS domain S-box-containing protein.
  
 0.818
kinE_1
PAS domain S-box-containing protein.
  
 0.818
kinE_2
Signal transduction histidine kinase.
  
 0.818
kinA_6
PAS domain S-box-containing protein.
  
 0.818
Your Current Organism:
Sporomusa acidovorans
NCBI taxonomy Id: 112900
Other names: ATCC 49682, DSM 3132, S. acidovorans, strain Mol
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.