Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
moeB_1 | moeB_2 | SAMN04488499_101360 | SAMN04488499_104430 | Molybdopterin or thiamine biosynthesis adenylyltransferase. | ThiF family protein. | 0.415 |
moeB_1 | tenI | SAMN04488499_101360 | SAMN04488499_107118 | Molybdopterin or thiamine biosynthesis adenylyltransferase. | Thiamine-phosphate pyrophosphorylase. | 0.770 |
moeB_1 | thiC | SAMN04488499_101360 | SAMN04488499_106526 | Molybdopterin or thiamine biosynthesis adenylyltransferase. | Hydroxymethylpyrimidine synthase; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. Belongs to the ThiC family. | 0.711 |
moeB_1 | thiD | SAMN04488499_101360 | SAMN04488499_102643 | Molybdopterin or thiamine biosynthesis adenylyltransferase. | Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase. | 0.728 |
moeB_1 | thiG | SAMN04488499_101360 | SAMN04488499_107116 | Molybdopterin or thiamine biosynthesis adenylyltransferase. | Thiazole synthase; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | 0.951 |
moeB_1 | thiH_1 | SAMN04488499_101360 | SAMN04488499_107117 | Molybdopterin or thiamine biosynthesis adenylyltransferase. | Tyrosine lyase ThiH. | 0.593 |
moeB_1 | thiM | SAMN04488499_101360 | SAMN04488499_11032 | Molybdopterin or thiamine biosynthesis adenylyltransferase. | Hydroxyethylthiazole kinase; Catalyzes the phosphorylation of the hydroxyl group of 4- methyl-5-beta-hydroxyethylthiazole (THZ); Belongs to the Thz kinase family. | 0.441 |
moeB_1 | thiS | SAMN04488499_101360 | SAMN04488499_107114 | Molybdopterin or thiamine biosynthesis adenylyltransferase. | Sulfur carrier protein. | 0.973 |
moeB_2 | moeB_1 | SAMN04488499_104430 | SAMN04488499_101360 | ThiF family protein. | Molybdopterin or thiamine biosynthesis adenylyltransferase. | 0.415 |
moeB_2 | tenI | SAMN04488499_104430 | SAMN04488499_107118 | ThiF family protein. | Thiamine-phosphate pyrophosphorylase. | 0.764 |
moeB_2 | thiC | SAMN04488499_104430 | SAMN04488499_106526 | ThiF family protein. | Hydroxymethylpyrimidine synthase; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. Belongs to the ThiC family. | 0.709 |
moeB_2 | thiD | SAMN04488499_104430 | SAMN04488499_102643 | ThiF family protein. | Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase. | 0.721 |
moeB_2 | thiG | SAMN04488499_104430 | SAMN04488499_107116 | ThiF family protein. | Thiazole synthase; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | 0.934 |
moeB_2 | thiH_1 | SAMN04488499_104430 | SAMN04488499_107117 | ThiF family protein. | Tyrosine lyase ThiH. | 0.510 |
moeB_2 | thiM | SAMN04488499_104430 | SAMN04488499_11032 | ThiF family protein. | Hydroxyethylthiazole kinase; Catalyzes the phosphorylation of the hydroxyl group of 4- methyl-5-beta-hydroxyethylthiazole (THZ); Belongs to the Thz kinase family. | 0.434 |
moeB_2 | thiS | SAMN04488499_104430 | SAMN04488499_107114 | ThiF family protein. | Sulfur carrier protein. | 0.970 |
moeZ | tenI | SAMN04488499_107115 | SAMN04488499_107118 | Sulfur carrier protein ThiS adenylyltransferase. | Thiamine-phosphate pyrophosphorylase. | 0.969 |
moeZ | thiC | SAMN04488499_107115 | SAMN04488499_106526 | Sulfur carrier protein ThiS adenylyltransferase. | Hydroxymethylpyrimidine synthase; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. Belongs to the ThiC family. | 0.798 |
moeZ | thiD | SAMN04488499_107115 | SAMN04488499_102643 | Sulfur carrier protein ThiS adenylyltransferase. | Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase. | 0.725 |
moeZ | thiG | SAMN04488499_107115 | SAMN04488499_107116 | Sulfur carrier protein ThiS adenylyltransferase. | Thiazole synthase; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | 0.994 |
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