STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hndC_4Respiratory-chain NADH dehydrogenase subunit. (439 aa)    
Predicted Functional Partners:
hndA_3
Thioredoxin-like [2Fe-2S] ferredoxin.
  
 0.999
SDE60491.1
Thioredoxin-like [2Fe-2S] ferredoxin.
  
 0.999
hndA_4
NADH-quinone oxidoreductase subunit E.
 0.999
sfrA_1
2Fe-2S iron-sulfur cluster binding domain-containing protein.
 
 0.997
hndA_2
NAD(P)-dependent iron-only hydrogenase diaphorase component iron-sulfur protein.
 0.995
hndA_1
NADH-quinone oxidoreductase subunit E.
 0.994
nuoE
NADH-quinone oxidoreductase subunit E.
 
 0.994
hndC_1
4Fe-4S dicluster domain-containing protein.
  
 0.993
hycG
Ni,Fe-hydrogenase III small subunit.
 
 0.987
sfrA_2
4Fe-4S binding domain-containing protein.
 
 0.983
Your Current Organism:
Sporomusa acidovorans
NCBI taxonomy Id: 112900
Other names: ATCC 49682, DSM 3132, S. acidovorans, strain Mol
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.