STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMC31449.1Uncharacterized conserved protein, DUF849 family. (309 aa)    
Predicted Functional Partners:
SMD03204.1
3-aminobutyryl-CoA ammonia-lyase.
  
 0.915
SMD03158.1
L-erythro-3,5-diaminohexanoate dehydrogenase.
 
  
  0.866
SMD03190.1
Beta-lysine 5,6-aminomutase alpha subunit.
 
   
 0.756
SMC31460.1
Ketopantoate reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid.
 
     0.751
SMC47012.1
Kynurenine formamidase.
 
    0.743
SMD03197.1
Beta-lysine 5,6-aminomutase beta subunit.
 
     0.727
SMC31475.1
Acetate CoA/acetoacetate CoA-transferase alpha subunit.
    
 0.691
SMD03170.1
Hypothetical protein.
 
     0.685
SMC31483.1
Acetate CoA/acetoacetate CoA-transferase beta subunit.
    
  0.664
SMD02716.1
Transcriptional regulator, XRE family with cupin sensor.
  
    0.635
Your Current Organism:
Sporomusa malonica
NCBI taxonomy Id: 112901
Other names: ATCC 49684, DSM 5090, S. malonica, strain WoG12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.