Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SMC39834.1 | SMC39864.1 | SAMN04488500_102214 | SAMN04488500_102219 | Flagellar hook-associated protein 3 FlgL. | Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | 0.956 |
| SMC39834.1 | SMC39894.1 | SAMN04488500_102214 | SAMN04488500_102222 | Flagellar hook-associated protein 3 FlgL. | Flagellin N-terminal helical region. | 0.873 |
| SMC39834.1 | SMC39924.1 | SAMN04488500_102214 | SAMN04488500_102223 | Flagellar hook-associated protein 3 FlgL. | Flagellin C-terminal helical region. | 0.716 |
| SMC39834.1 | SMC65883.1 | SAMN04488500_102214 | SAMN04488500_106220 | Flagellar hook-associated protein 3 FlgL. | Flagellar motor switch protein FliM. | 0.941 |
| SMC39834.1 | SMD09808.1 | SAMN04488500_102214 | SAMN04488500_12519 | Flagellar hook-associated protein 3 FlgL. | Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | 0.848 |
| SMC39834.1 | csrA | SAMN04488500_102214 | SAMN04488500_102217 | Flagellar hook-associated protein 3 FlgL. | Carbon storage regulator, CsrA; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW. | 0.854 |
| SMC39834.1 | fliW | SAMN04488500_102214 | SAMN04488500_102216 | Flagellar hook-associated protein 3 FlgL. | Flagellar assembly factor FliW; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum. | 0.982 |
| SMC39864.1 | SMC39834.1 | SAMN04488500_102219 | SAMN04488500_102214 | Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Flagellar hook-associated protein 3 FlgL. | 0.956 |
| SMC39864.1 | SMC39894.1 | SAMN04488500_102219 | SAMN04488500_102222 | Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Flagellin N-terminal helical region. | 0.945 |
| SMC39864.1 | SMC39924.1 | SAMN04488500_102219 | SAMN04488500_102223 | Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Flagellin C-terminal helical region. | 0.877 |
| SMC39864.1 | SMC65883.1 | SAMN04488500_102219 | SAMN04488500_106220 | Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Flagellar motor switch protein FliM. | 0.944 |
| SMC39864.1 | SMC96173.1 | SAMN04488500_102219 | SAMN04488500_11594 | Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Flagellar hook-associated protein 3 FlgL. | 0.938 |
| SMC39864.1 | SMD09785.1 | SAMN04488500_102219 | SAMN04488500_12513 | Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Flagellar hook-associated protein 3 FlgL; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | 0.917 |
| SMC39864.1 | SMD09808.1 | SAMN04488500_102219 | SAMN04488500_12519 | Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | 0.916 |
| SMC39864.1 | csrA | SAMN04488500_102219 | SAMN04488500_102217 | Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Carbon storage regulator, CsrA; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW. | 0.860 |
| SMC39864.1 | csrA-2 | SAMN04488500_102219 | SAMN04488500_12518 | Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Carbon storage regulator, CsrA; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW. | 0.525 |
| SMC39864.1 | fliW | SAMN04488500_102219 | SAMN04488500_102216 | Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Flagellar assembly factor FliW; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum. | 0.948 |
| SMC39894.1 | SMC39834.1 | SAMN04488500_102222 | SAMN04488500_102214 | Flagellin N-terminal helical region. | Flagellar hook-associated protein 3 FlgL. | 0.873 |
| SMC39894.1 | SMC39864.1 | SAMN04488500_102222 | SAMN04488500_102219 | Flagellin N-terminal helical region. | Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | 0.945 |
| SMC39894.1 | SMC39924.1 | SAMN04488500_102222 | SAMN04488500_102223 | Flagellin N-terminal helical region. | Flagellin C-terminal helical region. | 0.749 |
page 1 of 5