STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMC51088.1Metallo-beta-lactamase superfamily protein. (244 aa)    
Predicted Functional Partners:
SMC76892.1
Superoxide reductase.
  
  
 0.705
SMC51063.1
Lactoylglutathione lyase.
       0.702
SMC89911.1
NADPH-dependent FMN reductase.
  
 
  0.684
SMC39192.1
Regulatory protein, luxR family.
    
 0.672
SMC76753.1
NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family.
  
 
 0.623
SMD12220.1
PAS domain S-box-containing protein.
 
  
  0.602
SMC69915.1
Hemerythrin.
  
  
 0.599
SMD09225.1
Hemerythrin.
  
  
 0.599
SMD14676.1
N-terminal 7TM region of histidine kinase.
 
  
  0.592
SMC50088.1
Signal transduction histidine kinase.
  
 
  0.569
Your Current Organism:
Sporomusa malonica
NCBI taxonomy Id: 112901
Other names: ATCC 49684, DSM 5090, S. malonica, strain WoG12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.