STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMC55748.1Penicillin-binding protein 1A. (658 aa)    
Predicted Functional Partners:
SMD05938.1
Stage V sporulation protein D (sporulation-specific penicillin-binding protein).
 
0.941
SMC70795.1
Penicillin-binding protein 2.
 
 
 0.926
SMC95704.1
Stage V sporulation protein D (sporulation-specific penicillin-binding protein).
 
 
0.916
SMC59181.1
Penicillin-binding protein 2.
 
 
0.905
SMC56154.1
Cell division initiation protein.
   
 
 0.905
SMC83089.1
Penicillin-binding protein 2.
 
 
0.898
SMD10534.1
Peptidoglycan glycosyltransferase.
 
 
0.897
SMC55960.1
Peptidoglycan glycosyltransferase.
 
 
0.892
SMD09142.1
Cell division protein FtsW; Belongs to the SEDS family.
 
 
 
 0.714
SMD05915.1
Cell division-specific peptidoglycan biosynthesis regulator FtsW; Belongs to the SEDS family.
 
 
 
 0.699
Your Current Organism:
Sporomusa malonica
NCBI taxonomy Id: 112901
Other names: ATCC 49684, DSM 5090, S. malonica, strain WoG12
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