Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SMC55822.1 | SMC55827.1 | SAMN04488500_10548 | SAMN04488500_10549 | Uncharacterized membrane protein YdjX, TVP38/TMEM64 family, SNARE-associated domain. | Hypothetical protein. | 0.621 |
SMC55822.1 | recG | SAMN04488500_10548 | SAMN04488500_10550 | Uncharacterized membrane protein YdjX, TVP38/TMEM64 family, SNARE-associated domain. | ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily. | 0.430 |
SMC55827.1 | SMC55822.1 | SAMN04488500_10549 | SAMN04488500_10548 | Hypothetical protein. | Uncharacterized membrane protein YdjX, TVP38/TMEM64 family, SNARE-associated domain. | 0.621 |
SMC55827.1 | SMC55837.1 | SAMN04488500_10549 | SAMN04488500_10551 | Hypothetical protein. | Hybrid cluster protein-associated redox disulfide domain-containing protein. | 0.467 |
SMC55827.1 | recG | SAMN04488500_10549 | SAMN04488500_10550 | Hypothetical protein. | ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily. | 0.464 |
SMC55837.1 | SMC55827.1 | SAMN04488500_10551 | SAMN04488500_10549 | Hybrid cluster protein-associated redox disulfide domain-containing protein. | Hypothetical protein. | 0.467 |
SMC55837.1 | recG | SAMN04488500_10551 | SAMN04488500_10550 | Hybrid cluster protein-associated redox disulfide domain-containing protein. | ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily. | 0.820 |
recG | SMC55822.1 | SAMN04488500_10550 | SAMN04488500_10548 | ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily. | Uncharacterized membrane protein YdjX, TVP38/TMEM64 family, SNARE-associated domain. | 0.430 |
recG | SMC55827.1 | SAMN04488500_10550 | SAMN04488500_10549 | ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily. | Hypothetical protein. | 0.464 |
recG | SMC55837.1 | SAMN04488500_10550 | SAMN04488500_10551 | ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily. | Hybrid cluster protein-associated redox disulfide domain-containing protein. | 0.820 |