STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMC64421.1Hypothetical protein. (122 aa)    
Predicted Functional Partners:
SMC64435.1
Hypothetical protein.
 
    
0.809
SMC62357.1
Tetratricopeptide repeat-containing protein.
   
 
 0.770
SMC87368.1
Tetratricopeptide repeat-containing protein.
   
 
 0.770
SMC64447.1
Protein of unknown function.
       0.749
SMC40673.1
Hypothetical protein.
    
 
 0.728
SMD10428.1
Serine protease Do.
    
 
 0.728
SMC64460.1
Uncharacterized conserved protein YloU, alkaline shock protein (Asp23) family.
       0.684
SMC64477.1
Hypothetical protein.
       0.509
pepA
Leucyl aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.
  
    0.503
SMD13240.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase.
 
  
 0.431
Your Current Organism:
Sporomusa malonica
NCBI taxonomy Id: 112901
Other names: ATCC 49684, DSM 5090, S. malonica, strain WoG12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.