STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMC65072.1Predicted Zn-dependent peptidase; Belongs to the peptidase M16 family. (417 aa)    
Predicted Functional Partners:
SMC83465.1
NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein.
  
 
 0.998
SMC86734.1
Amino acid adenylation domain-containing protein/thioester reductase domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 0.987
SMC37380.1
2Fe-2S iron-sulfur cluster binding domain-containing protein.
   
 
 0.977
SMC37366.1
NADH-quinone oxidoreductase subunit F.
   
 
 0.965
SMC83967.1
NADH-quinone oxidoreductase subunit F.
   
 
 0.965
SMC65425.1
4Fe-4S dicluster domain-containing protein; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
  
 
 0.947
SMC37355.1
NADH-quinone oxidoreductase subunit E.
   
 
 0.942
SMC60020.1
Hypothetical protein.
   
 
 0.942
SMC83497.1
NAD(P)-dependent iron-only hydrogenase diaphorase component iron-sulfur protein.
   
 
 0.942
SMC83973.1
NADH-quinone oxidoreductase subunit E.
   
 
 0.942
Your Current Organism:
Sporomusa malonica
NCBI taxonomy Id: 112901
Other names: ATCC 49684, DSM 5090, S. malonica, strain WoG12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.