STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMC75706.1Signal transduction histidine kinase. (422 aa)    
Predicted Functional Partners:
SMC70974.1
PAS domain S-box-containing protein.
 
0.993
SMC75719.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 0.979
SMC50088.1
Signal transduction histidine kinase.
0.978
SMC39192.1
Regulatory protein, luxR family.
  
 0.976
SMC97808.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
  
 0.973
SMC46896.1
PAS fold-containing protein.
 
0.951
SMC80131.1
His Kinase A (phospho-acceptor) domain-containing protein.
 
0.936
SMD04410.1
Two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP.
 0.928
SMD02662.1
His Kinase A (phospho-acceptor) domain-containing protein.
0.925
SMC51794.1
Response regulator receiver domain-containing protein.
 
 0.919
Your Current Organism:
Sporomusa malonica
NCBI taxonomy Id: 112901
Other names: ATCC 49684, DSM 5090, S. malonica, strain WoG12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.