STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMC76638.1Protein of unknown function. (199 aa)    
Predicted Functional Partners:
SMC88237.1
Hypothetical protein.
  
     0.641
SMD07717.1
Hypothetical protein.
 
     0.545
SMC85051.1
Protein of unknown function.
  
     0.516
SMD05224.1
Protein of unknown function.
  
     0.461
SMC76650.1
DNA topoisomerase-3.
       0.459
SMC76661.1
Rhodanese-related sulfurtransferase.
       0.459
SMC75127.1
Hypothetical protein.
  
     0.408
SMC97683.1
Hypothetical protein.
  
     0.405
Your Current Organism:
Sporomusa malonica
NCBI taxonomy Id: 112901
Other names: ATCC 49684, DSM 5090, S. malonica, strain WoG12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.