STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMC83891.1Formate dehydrogenase alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (557 aa)    
Predicted Functional Partners:
SMC83465.1
NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein.
  
 0.995
SMC83899.1
Molybdopterin oxidoreductase Fe4S4 domain-containing protein.
     0.991
SMC83458.1
NAD(P)-dependent iron-only hydrogenase catalytic subunit.
  
 0.981
SMD08806.1
NAD(P)-dependent iron-only hydrogenase catalytic subunit.
  
 0.978
SMC83855.1
Electron transport protein HydN.
 
 0.977
SMC83885.1
Electron transport protein HydN.
 
 0.975
SMC83837.1
4Fe-4S binding domain-containing protein.
 
     0.971
SMC37366.1
NADH-quinone oxidoreductase subunit F.
  
 0.957
SMC83520.1
Iron only hydrogenase large subunit, C-terminal domain.
   
 0.954
SMC83958.1
NAD(P)-dependent iron-only hydrogenase catalytic subunit.
  
 0.950
Your Current Organism:
Sporomusa malonica
NCBI taxonomy Id: 112901
Other names: ATCC 49684, DSM 5090, S. malonica, strain WoG12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.