STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMD04574.1Transglycosylase SLT domain-containing protein. (242 aa)    
Predicted Functional Partners:
SMC38429.1
Flagellar basal-body rod protein FlgG.
  
 
 0.825
SMD04570.1
Sporulation protein YqfC/sporulation protein YabP,TIGR02892.
       0.784
SMD04592.1
Spore cortex biosynthesis protein YabQ.
 
     0.771
SMD04603.1
Hypothetical protein.
       0.732
SMC38435.1
Flagellar basal-body rod protein FlgG.
  
 
 0.728
SMC65918.1
Flagellar hook protein FlgE.
  
 
 0.728
fliE
Flagellar hook-basal body complex protein FliE.
  
  
 0.718
SMC96173.1
Flagellar hook-associated protein 3 FlgL.
 
 
 0.708
SMC65979.1
Flagellum-specific ATP synthase.
  
  
 0.706
SMD09785.1
Flagellar hook-associated protein 3 FlgL; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
 
 
 0.706
Your Current Organism:
Sporomusa malonica
NCBI taxonomy Id: 112901
Other names: ATCC 49684, DSM 5090, S. malonica, strain WoG12
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