Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SMC56858.1 | SMC56941.1 | SAMN04488500_105148 | SAMN04488500_105152 | Methylmalonyl-CoA mutase, cobalamin-binding subunit. | Cys/Met metabolism PLP-dependent enzyme. | 0.841 |
SMC56858.1 | SMD15621.1 | SAMN04488500_105148 | SAMN04488500_13820 | Methylmalonyl-CoA mutase, cobalamin-binding subunit. | Transporter family protein. | 0.427 |
SMC56941.1 | SMC56858.1 | SAMN04488500_105152 | SAMN04488500_105148 | Cys/Met metabolism PLP-dependent enzyme. | Methylmalonyl-CoA mutase, cobalamin-binding subunit. | 0.841 |
SMC56941.1 | SMD15621.1 | SAMN04488500_105152 | SAMN04488500_13820 | Cys/Met metabolism PLP-dependent enzyme. | Transporter family protein. | 0.463 |
SMD00522.1 | SMD15621.1 | SAMN04488500_1185 | SAMN04488500_13820 | Small multidrug resistance pump. | Transporter family protein. | 0.517 |
SMD12643.1 | SMD15621.1 | SAMN04488500_12912 | SAMN04488500_13820 | Small Multidrug Resistance protein. | Transporter family protein. | 0.517 |
SMD15614.1 | SMD15621.1 | SAMN04488500_13819 | SAMN04488500_13820 | Beta-lactamase class A. | Transporter family protein. | 0.486 |
SMD15621.1 | SMC56858.1 | SAMN04488500_13820 | SAMN04488500_105148 | Transporter family protein. | Methylmalonyl-CoA mutase, cobalamin-binding subunit. | 0.427 |
SMD15621.1 | SMC56941.1 | SAMN04488500_13820 | SAMN04488500_105152 | Transporter family protein. | Cys/Met metabolism PLP-dependent enzyme. | 0.463 |
SMD15621.1 | SMD00522.1 | SAMN04488500_13820 | SAMN04488500_1185 | Transporter family protein. | Small multidrug resistance pump. | 0.517 |
SMD15621.1 | SMD12643.1 | SAMN04488500_13820 | SAMN04488500_12912 | Transporter family protein. | Small Multidrug Resistance protein. | 0.517 |
SMD15621.1 | SMD15614.1 | SAMN04488500_13820 | SAMN04488500_13819 | Transporter family protein. | Beta-lactamase class A. | 0.486 |