Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEO33348.1 | SEO33381.1 | SAMN04490178_101239 | SAMN04490178_101240 | DNA polymerase III, delta subunit. | Competence protein ComEC. | 0.849 |
SEO33348.1 | SEO33417.1 | SAMN04490178_101239 | SAMN04490178_101241 | DNA polymerase III, delta subunit. | Competence protein ComEA. | 0.786 |
SEO33381.1 | SEO33348.1 | SAMN04490178_101240 | SAMN04490178_101239 | Competence protein ComEC. | DNA polymerase III, delta subunit. | 0.849 |
SEO33381.1 | SEO33417.1 | SAMN04490178_101240 | SAMN04490178_101241 | Competence protein ComEC. | Competence protein ComEA. | 0.932 |
SEO33381.1 | SEO34987.1 | SAMN04490178_101240 | SAMN04490178_101284 | Competence protein ComEC. | Hypothetical protein. | 0.516 |
SEO33381.1 | SEO35069.1 | SAMN04490178_101240 | SAMN04490178_101286 | Competence protein ComEC. | Hypothetical protein. | 0.524 |
SEO33381.1 | SEO35119.1 | SAMN04490178_101240 | SAMN04490178_101287 | Competence protein ComEC. | Leader peptidase (prepilin peptidase) / N-methyltransferase. | 0.758 |
SEO33381.1 | SEO35197.1 | SAMN04490178_101240 | SAMN04490178_101289 | Competence protein ComEC. | Type IV pilus assembly protein PilC. | 0.771 |
SEO33381.1 | SEO35267.1 | SAMN04490178_101240 | SAMN04490178_101291 | Competence protein ComEC. | Type II secretion system protein E (GspE). | 0.632 |
SEO33381.1 | SEO71425.1 | SAMN04490178_101240 | SAMN04490178_104127 | Competence protein ComEC. | comF family protein. | 0.886 |
SEO33417.1 | SEO33348.1 | SAMN04490178_101241 | SAMN04490178_101239 | Competence protein ComEA. | DNA polymerase III, delta subunit. | 0.786 |
SEO33417.1 | SEO33381.1 | SAMN04490178_101241 | SAMN04490178_101240 | Competence protein ComEA. | Competence protein ComEC. | 0.932 |
SEO33417.1 | SEO34987.1 | SAMN04490178_101241 | SAMN04490178_101284 | Competence protein ComEA. | Hypothetical protein. | 0.697 |
SEO33417.1 | SEO35069.1 | SAMN04490178_101241 | SAMN04490178_101286 | Competence protein ComEA. | Hypothetical protein. | 0.710 |
SEO33417.1 | SEO35119.1 | SAMN04490178_101241 | SAMN04490178_101287 | Competence protein ComEA. | Leader peptidase (prepilin peptidase) / N-methyltransferase. | 0.801 |
SEO33417.1 | SEO35197.1 | SAMN04490178_101241 | SAMN04490178_101289 | Competence protein ComEA. | Type IV pilus assembly protein PilC. | 0.893 |
SEO33417.1 | SEO35267.1 | SAMN04490178_101241 | SAMN04490178_101291 | Competence protein ComEA. | Type II secretion system protein E (GspE). | 0.897 |
SEO33417.1 | SEO47997.1 | SAMN04490178_101241 | SAMN04490178_102153 | Competence protein ComEA. | 4-alpha-glucanotransferase; Belongs to the glycosyl hydrolase 13 family. | 0.676 |
SEO33417.1 | SEO71425.1 | SAMN04490178_101241 | SAMN04490178_104127 | Competence protein ComEA. | comF family protein. | 0.759 |
SEO33417.1 | SEP40286.1 | SAMN04490178_101241 | SAMN04490178_12521 | Competence protein ComEA. | Single-strand DNA-binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism. | 0.776 |
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