Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEO33274.1 | SEO35978.1 | SAMN04490178_101237 | SAMN04490178_101311 | Spore protease. | Stage V sporulation protein AF. | 0.801 |
SEO33274.1 | SEO36115.1 | SAMN04490178_101237 | SAMN04490178_101315 | Spore protease. | Stage V sporulation protein AE. | 0.807 |
SEO33274.1 | SEO36156.1 | SAMN04490178_101237 | SAMN04490178_101316 | Spore protease. | Stage V sporulation protein AD. | 0.932 |
SEO33274.1 | SEO36198.1 | SAMN04490178_101237 | SAMN04490178_101317 | Spore protease. | Stage V sporulation protein AC. | 0.873 |
SEO33274.1 | SEO36307.1 | SAMN04490178_101237 | SAMN04490178_101320 | Spore protease. | RNA polymerase, sigma subunit, RpoX/SigF; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.731 |
SEO33274.1 | SEO36337.1 | SAMN04490178_101237 | SAMN04490178_101321 | Spore protease. | Stage II sporulation protein AB (anti-sigma F factor). | 0.783 |
SEO33274.1 | SEO36694.1 | SAMN04490178_101237 | SAMN04490178_101330 | Spore protease. | RNA polymerase, sigma 29 subunit, SigE; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.797 |
SEO33274.1 | SEO93668.1 | SAMN04490178_101237 | SAMN04490178_10780 | Spore protease. | Spore germination protein KA. | 0.806 |
SEO33274.1 | SEP10967.1 | SAMN04490178_101237 | SAMN04490178_11098 | Spore protease. | Spore germination protein KA. | 0.807 |
SEO33274.1 | SEP43989.1 | SAMN04490178_101237 | SAMN04490178_13129 | Spore protease. | Spore germination protein KA. | 0.802 |
SEO35978.1 | SEO33274.1 | SAMN04490178_101311 | SAMN04490178_101237 | Stage V sporulation protein AF. | Spore protease. | 0.801 |
SEO35978.1 | SEO36115.1 | SAMN04490178_101311 | SAMN04490178_101315 | Stage V sporulation protein AF. | Stage V sporulation protein AE. | 0.950 |
SEO35978.1 | SEO36156.1 | SAMN04490178_101311 | SAMN04490178_101316 | Stage V sporulation protein AF. | Stage V sporulation protein AD. | 0.955 |
SEO35978.1 | SEO36198.1 | SAMN04490178_101311 | SAMN04490178_101317 | Stage V sporulation protein AF. | Stage V sporulation protein AC. | 0.950 |
SEO35978.1 | SEO36307.1 | SAMN04490178_101311 | SAMN04490178_101320 | Stage V sporulation protein AF. | RNA polymerase, sigma subunit, RpoX/SigF; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.792 |
SEO35978.1 | SEO36337.1 | SAMN04490178_101311 | SAMN04490178_101321 | Stage V sporulation protein AF. | Stage II sporulation protein AB (anti-sigma F factor). | 0.820 |
SEO35978.1 | SEO36694.1 | SAMN04490178_101311 | SAMN04490178_101330 | Stage V sporulation protein AF. | RNA polymerase, sigma 29 subunit, SigE; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.822 |
SEO36115.1 | SEO33274.1 | SAMN04490178_101315 | SAMN04490178_101237 | Stage V sporulation protein AE. | Spore protease. | 0.807 |
SEO36115.1 | SEO35978.1 | SAMN04490178_101315 | SAMN04490178_101311 | Stage V sporulation protein AE. | Stage V sporulation protein AF. | 0.950 |
SEO36115.1 | SEO36156.1 | SAMN04490178_101315 | SAMN04490178_101316 | Stage V sporulation protein AE. | Stage V sporulation protein AD. | 0.973 |
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