STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEO63832.1His Kinase A (phospho-acceptor) domain-containing protein. (418 aa)    
Predicted Functional Partners:
SEO60279.1
Dihydrolipoamide dehydrogenase.
    
 0.997
SEO63868.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 0.984
SEP47874.1
His Kinase A (phospho-acceptor) domain-containing protein.
 
 
0.966
SEP13297.1
PAS domain-containing protein.
 
 
0.960
SEO94437.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 0.953
SEO92638.1
Two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP.
 0.941
SEO95613.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
 0.936
SEP33307.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 0.935
SEO89226.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 0.930
SEO89281.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 0.929
Your Current Organism:
Propionispora vibrioides
NCBI taxonomy Id: 112903
Other names: DSM 13305, JCM 17185, P. vibrioides, Propionispora vibrioides Biebl et al. 2001, strain FKBS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.