STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEO72259.1Heparinase II/III-like protein. (741 aa)    
Predicted Functional Partners:
SEO72565.1
Predicted dehydrogenase.
 
   
 0.860
SEO72236.1
Glycosyl transferases group 1.
 
 
 0.858
SEO72290.1
Glycosyltransferase involved in cell wall bisynthesis.
 
 
 0.846
SEO72167.1
Glycosyltransferase involved in cell wall bisynthesis.
  
 
 0.821
SEO72197.1
Glycosyltransferase involved in cell wall bisynthesis.
  
 
 0.821
SEP22788.1
Glutamate synthase (ferredoxin).
  
 
 0.771
SEO72599.1
UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
 
  
 0.725
SEP40404.1
NADPH-dependent glutamate synthase beta chain.
  
 
 0.720
SEP46467.1
Homoserine dehydrogenase.
  
 
 0.715
SEO79401.1
Aspartate kinase; Belongs to the aspartokinase family.
  
 
 0.704
Your Current Organism:
Propionispora vibrioides
NCBI taxonomy Id: 112903
Other names: DSM 13305, JCM 17185, P. vibrioides, Propionispora vibrioides Biebl et al. 2001, strain FKBS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.