STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEO92638.1Two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP. (230 aa)    
Predicted Functional Partners:
SEP13297.1
PAS domain-containing protein.
0.979
SEP46308.1
Signal transduction histidine kinase.
 0.970
SEP10190.1
Two-component system, OmpR family, sensor histidine kinase BaeS.
 0.967
SEP08754.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
 
 0.957
SEO89254.1
His Kinase A (phospho-acceptor) domain-containing protein.
 0.956
SEP33325.1
Two-component system, OmpR family, sensor histidine kinase BaeS.
 0.956
SEP10704.1
PAS domain S-box-containing protein.
 
 0.954
SEO89892.1
Signal transduction histidine kinase.
 0.951
SEP37322.1
His Kinase A (phospho-acceptor) domain-containing protein.
 0.951
SEO91808.1
Signal transduction histidine kinase.
 0.950
Your Current Organism:
Propionispora vibrioides
NCBI taxonomy Id: 112903
Other names: DSM 13305, JCM 17185, P. vibrioides, Propionispora vibrioides Biebl et al. 2001, strain FKBS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.