STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEP03853.1D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (346 aa)    
Predicted Functional Partners:
serC
Phosphoserine aminotransferase apoenzyme; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine.
  
 0.934
SEP45781.1
Hydroxypyruvate reductase.
 
  
 0.752
SEP47934.1
L-threonine ammonia-lyase.
  
 
 0.751
SEO61150.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 
 0.748
SEP45510.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 
 0.748
SEP03875.1
L-fuculose 1-phosphate aldolase.
  
  
 0.732
SEP20361.1
Aspartate aminotransferase.
 
 0.688
SEP45060.1
5-methyltetrahydrofolate--homocysteine methyltransferase.
   
 
 0.688
SEP29771.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
  
 
 0.675
SEO49688.1
Acetoin utilization deacetylase AcuC.
   
 0.673
Your Current Organism:
Propionispora vibrioides
NCBI taxonomy Id: 112903
Other names: DSM 13305, JCM 17185, P. vibrioides, Propionispora vibrioides Biebl et al. 2001, strain FKBS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.