STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEP47329.12,4-dienoyl-CoA reductase. (396 aa)    
Predicted Functional Partners:
SEP40404.1
NADPH-dependent glutamate synthase beta chain.
 
  
 0.752
SEP34858.1
Electron transfer flavoprotein beta subunit.
  
 
 0.733
SEP43658.1
Electron transfer flavoprotein beta subunit.
  
 
 0.733
SEP22788.1
Glutamate synthase (ferredoxin).
    
 0.724
SEP20611.1
2,4-dienoyl-CoA reductase.
 
 
0.693
SEP42460.1
2-enoate reductase.
 
 
0.680
SEP47325.1
NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family.
     
 0.659
SEO85330.1
2,4-dienoyl-CoA reductase.
 
 
0.657
SEP14997.1
Iron-binding zinc finger CDGSH type.
    
 0.654
SEP20735.1
Thioredoxin reductase (NADPH).
  
 
 0.618
Your Current Organism:
Propionispora vibrioides
NCBI taxonomy Id: 112903
Other names: DSM 13305, JCM 17185, P. vibrioides, Propionispora vibrioides Biebl et al. 2001, strain FKBS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.